BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining

19 October 2022

Papers citing "BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining"

50 / 318 papers shown

Title
MiniGPT-Med: Large Language Model as a General Interface for Radiology Diagnosis Asma Alkhaldi Raneem Alnajim Layan Alabdullatef Rawan Alyahya Jun Chen Deyao Zhu Ahmed Z. Alsinan Mohamed Elhoseiny LM&MA MedIm 43 1 0 04 Jul 2024
Efficient Training of Language Models with Compact and Consistent Next Token Distributions Ashutosh Sathe Sunita Sarawagi 19 0 0 03 Jul 2024
PhysioLLM: Supporting Personalized Health Insights with Wearables and Large Language Models Cathy Mengying Fang Valdemar Danry Nathan W Whitmore Andria Bao Andrew Hutchison Cayden Pierce Pattie Maes LM&MA AI4MH 30 9 0 27 Jun 2024
Panacea: A foundation model for clinical trial search, summarization, design, and recruitment J. Lin H. Xu Zifeng Wang Sheng Wang J. Sun ELM LM&MA 16 1 0 25 Jun 2024
Evaluation of Language Models in the Medical Context Under Resource-Constrained Settings Andrea Posada Daniel Rueckert Felix Meissen Philip Muller LM&MA ELM 29 0 0 24 Jun 2024
Geneverse: A collection of Open-source Multimodal Large Language Models for Genomic and Proteomic Research Tianyu Liu Yijia Xiao Xiao Luo Hua Xu W. Zheng Hongyu Zhao 21 0 0 21 Jun 2024
Rethinking Pruning Large Language Models: Benefits and Pitfalls of Reconstruction Error Minimization Sungbin Shin Wonpyo Park Jaeho Lee Namhoon Lee 23 0 0 21 Jun 2024
Improving Expert Radiology Report Summarization by Prompting Large Language Models with a Layperson Summary Xingmeng Zhao Tongnian Wang Anthony Rios LM&MA 36 0 0 20 Jun 2024
Mind the Privacy Unit! User-Level Differential Privacy for Language Model Fine-Tuning Lynn Chua Badih Ghazi Yangsibo Huang Pritish Kamath Ravi Kumar Daogao Liu Pasin Manurangsi Amer Sinha Chiyuan Zhang 18 11 0 20 Jun 2024
Self-Regulated Data-Free Knowledge Amalgamation for Text Classification Prashanth Vijayaraghavan Hongzhi Wang Luyao Shi Tyler Baldwin David Beymer Ehsan Degan 19 1 0 16 Jun 2024
A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery Yu Zhang Xiusi Chen Bowen Jin Sheng Wang Shuiwang Ji Wei Wang Jiawei Han 35 17 0 16 Jun 2024
Benchmarking Generative Models on Computational Thinking Tests in Elementary Visual Programming Victor-Alexandru Pădurean Adish Singla ELM 44 3 0 14 Jun 2024
Enhancing Cross-Modal Fine-Tuning with Gradually Intermediate Modality Generation Lincan Cai Shuang Li Wenxuan Ma Jingxuan Kang Binhui Xie Zixun Sun Chengwei Zhu MoE MoMe 27 0 0 13 Jun 2024
Advancing High Resolution Vision-Language Models in Biomedicine Zekai Chen Arda Pekis Kevin Brown MedIm LM&MA 16 4 0 12 Jun 2024
Rapid Review of Generative AI in Smart Medical Applications Yuan Sun Jorge Ortiz MedIm 27 12 0 08 Jun 2024
A Survey on Medical Large Language Models: Technology, Application, Trustworthiness, and Future Directions Lei Liu Xiaoyan Yang Junchi Lei Xiaoyang Liu Yue Shen ... Peng Wei Jinjie Gu Zhixuan Chu Zhan Qin Kui Ren LM&MA AILaw 31 14 0 06 Jun 2024
LlamaCare: A Large Medical Language Model for Enhancing Healthcare Knowledge Sharing Maojun Sun 27 1 0 04 Jun 2024
Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings Hiroaki Yamagiwa Ryoma Hashimoto Kiwamu Arakane Ken Murakami Shou Soeda Momose Oyama Mariko Okada Hidetoshi Shimodaira Hidetoshi Shimodaira 23 0 0 03 Jun 2024
DS@BioMed at ImageCLEFmedical Caption 2024: Enhanced Attention Mechanisms in Medical Caption Generation through Concept Detection Integration Nhi Ngoc-Yen Nguyen Le-Huy Tu Dieu-Phuong Nguyen Nhat-Tan Do Minh Triet Thai Bao-Thien Nguyen-Tat MedIm 24 1 0 01 Jun 2024
A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models Hirofumi Tsuruta Hiroyuki Yamazaki R. Maeda Ryotaro Tamura Akihiro Imura 13 0 0 29 May 2024
UIT-DarkCow team at ImageCLEFmedical Caption 2024: Diagnostic Captioning for Radiology Images Efficiency with Transformer Models Quan Van Nguyen Huy Quang Pham Dan Quang Tran Thang Kien-Bao Nguyen Nhat-Hao Nguyen-Dang Bao-Thien Nguyen-Tat MedIm 24 1 0 27 May 2024
A Large Language Model-based multi-agent manufacturing system for intelligent shopfloor Zhen Zhao Dunbing Tang Haihua Zhu Zequn Zhang Kai Chen Changchun Liu Yuchen Ji AI4CE LLMAG 27 0 0 27 May 2024
Assessing Empathy in Large Language Models with Real-World Physician-Patient Interactions Man Luo Christopher J. Warren Lu Cheng Haidar M Abdul-Muhsin Imon Banerjee LM&MA AI4MH 27 2 0 26 May 2024
PitVQA: Image-grounded Text Embedding LLM for Visual Question Answering in Pituitary Surgery Runlong He Mengya Xu Adrito Das Danyal Z. Khan Sophia Bano Hani J. Marcus Danail Stoyanov Matthew J. Clarkson Mobarakol Islam 32 6 0 22 May 2024
Efficient Two-Stage Gaussian Process Regression Via Automatic Kernel Search and Subsampling Shifan Zhao Jiaying Lu Carl Yang Edmond Chow Yuanzhe Xi 21 1 0 22 May 2024
Large Language Models for Medicine: A Survey Yanxin Zheng Wensheng Gan Zefeng Chen Zhenlian Qi Qian Liang Philip S. Yu LM&MA 16 4 0 20 May 2024
PRISM: A Multi-Modal Generative Foundation Model for Slide-Level Histopathology George Shaikovski Adam Casson Kristen Severson Eric Zimmermann Yi Kan Wang ... Peter Hamilton William A. Moye Eugene Vorontsov Siqi Liu Thomas J. Fuchs MedIm 22 22 0 16 May 2024
PromptLink: Leveraging Large Language Models for Cross-Source Biomedical Concept Linking Yuzhang Xie Jiaying Lu Joyce C. Ho Fadi B Nahab Xiao Hu Carl Yang 33 0 0 13 May 2024
CataLM: Empowering Catalyst Design Through Large Language Models Ludi Wang Xueqing Chen Yi Du Yuanchun Zhou Yang Gao Wenjuan Cui 21 2 0 13 May 2024
DrugLLM: Open Large Language Model for Few-shot Molecule Generation Xianggen Liu Yan Guo Haoran Li Jin Liu Shudong Huang Bowen Ke Jiancheng Lv 23 5 0 07 May 2024
MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoning Wenqi Shi Ran Xu Yuchen Zhuang Yue Yu Hang Wu Carl Yang M. D. Wang MedIm LM&MA 33 18 0 05 May 2024
Prompt engineering paradigms for medical applications: scoping review and recommendations for better practices Jamil Zaghir Marco Naguib Mina Bjelogrlic Aurélie Névéol Xavier Tannier Christian Lovis AI4CE LM&MA 17 6 0 02 May 2024
Almanac Copilot: Towards Autonomous Electronic Health Record Navigation C. Zakka Joseph Cho Gracia Fahed R. Shad Michael Moor ... Vishnu Ravi Oliver Aalami Roxana Daneshjou Akshay Chaudhari W. Hiesinger 19 0 0 30 Apr 2024
BMRetriever: Tuning Large Language Models as Better Biomedical Text Retrievers Ran Xu Wenqi Shi Yue Yu Yuchen Zhuang Yanqiao Zhu M. D. Wang Joyce C. Ho Chao Zhang Carl Yang LM&MA 40 19 0 29 Apr 2024
UMass-BioNLP at MEDIQA-M3G 2024: DermPrompt -- A Systematic Exploration of Prompt Engineering with GPT-4V for Dermatological Diagnosis Parth Vashisht Abhilasha Lodha Mukta Maddipatla Zonghai Yao Avijit Mitra Zhichao Yang Junda Wang Sunjae Kwon Hong-ye Yu LM&MA 18 1 0 27 Apr 2024
Continual Learning of Large Language Models: A Comprehensive Survey Haizhou Shi Zihao Xu Hengyi Wang Weiyi Qin Wenyuan Wang Yibin Wang Zifeng Wang Sayna Ebrahimi Hao Wang CLL KELM LRM 32 62 0 25 Apr 2024
Hippocrates: An Open-Source Framework for Advancing Large Language Models in Healthcare Emre Can Acikgoz Osman Batur .Ince Rayene Bench Arda Anil Boz .Ilker Kesen Aykut Erdem Erkut Erdem LM&MA 27 9 0 25 Apr 2024
Fusion of Domain-Adapted Vision and Language Models for Medical Visual Question Answering Cuong Nhat Ha Shima Asaadi Sanjeev Kumar Karn Oladimeji Farri Tobias Heimann Thomas Runkler 19 3 0 24 Apr 2024
Assessing The Potential Of Mid-Sized Language Models For Clinical QA Elliot Bolton Betty Xiong Vijaytha Muralidharan J. Schamroth Vivek Muralidharan Christopher D. Manning R. Daneshjou AI4MH ELM LM&MA 17 4 0 24 Apr 2024
A Comprehensive Survey on Evaluating Large Language Model Applications in the Medical Industry Yining Huang Keke Tang Meilian Chen Boyuan Wang ELM LM&MA 16 13 0 24 Apr 2024
CT-Agent: Clinical Trial Multi-Agent with Large Language Model-based Reasoning Ling Yue Tianfan Fu LLMAG LRM ELM 17 4 0 23 Apr 2024
Automated Text Mining of Experimental Methodologies from Biomedical Literature Ziqing Guo 21 1 0 21 Apr 2024
"I Wish There Were an AI": Challenges and AI Potential in Cancer Patient-Provider Communication Ziqi Yang Xuhai Xu Bingsheng Yao Jiachen Li Jennifer Bagdasarian G. Gao Dakuo Wang 14 3 0 20 Apr 2024
On the Scalability of GNNs for Molecular Graphs Maciej Sypetkowski Frederik Wenkel Farimah Poursafaei Nia Dickson Karush Suri Philip Fradkin Dominique Beaini GNN AI4CE 26 11 0 17 Apr 2024
LLMem: Estimating GPU Memory Usage for Fine-Tuning Pre-Trained LLMs Taeho Kim Yanming Wang Vatshank Chaturvedi Lokesh Gupta Seyeon Kim Yongin Kwon Sangtae Ha 20 4 0 16 Apr 2024
Unveiling LLM Evaluation Focused on Metrics: Challenges and Solutions Taojun Hu Xiao-Hua Zhou ELM 16 12 0 14 Apr 2024
Medical mT5: An Open-Source Multilingual Text-to-Text LLM for The Medical Domain Iker García-Ferrero Rodrigo Agerri Aitziber Atutxa Salazar Elena Cabrio Iker de la Iglesia ... Johana Ramirez-Romero German Rigau J. M. Villa-Gonzalez S. Villata Andrea Zaninello 75 19 0 11 Apr 2024
MedExpQA: Multilingual Benchmarking of Large Language Models for Medical Question Answering Inigo Alonso Maite Oronoz Rodrigo Agerri AI4MH LM&MA ELM 38 14 1 08 Apr 2024
BEAR: A Unified Framework for Evaluating Relational Knowledge in Causal and Masked Language Models Hongyu Lin Alexis Conneau Alan Akbik 25 5 0 05 Apr 2024
Empowering Biomedical Discovery with AI Agents Shanghua Gao Ada Fang Yepeng Huang Valentina Giunchiglia Ayush Noori Jonathan Richard Schwarz Yasha Ektefaie Jovana Kondic Marinka Zitnik LLMAG AI4CE 22 62 0 03 Apr 2024