BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining

19 October 2022

Papers citing "BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining"

50 / 318 papers shown

Title
FairCLIP: Harnessing Fairness in Vision-Language Learning Yan Luo Minfei Shi Muhammad Osama Khan Muhammad Muneeb Afzal Hao Huang ... Luo Song Ava Kouhana T. Elze Yi Fang Mengyu Wang VLM 30 30 0 29 Mar 2024
BioMedLM: A 2.7B Parameter Language Model Trained On Biomedical Text Elliot Bolton Abhinav Venigalla Michihiro Yasunaga David Leo Wright Hall Betty Xiong ... R. Daneshjou Jonathan Frankle Percy Liang Michael Carbin Christopher D. Manning LM&MA MedIm 19 45 0 27 Mar 2024
AI for Biomedicine in the Era of Large Language Models Zhenyu Bi Sajib Acharjee Dip Daniel Hajialigol Sindhura Kommu Hanwen Liu Meng Lu Xuan Wang LM&MA AI4CE 18 5 0 23 Mar 2024
A Continued Pretrained LLM Approach for Automatic Medical Note Generation Dong Yuan Eti Rastogi Gautam Naik Sree Prasanna Rajagopal Sagar Goyal Fen Zhao Jai Chintagunta Jeff Ward LM&MA AI4MH 22 19 0 14 Mar 2024
Zero-shot and Few-shot Generation Strategies for Artificial Clinical Records Erlend Frayling Jake Lever Graham McDonald SyDa 19 1 0 13 Mar 2024
MoleculeQA: A Dataset to Evaluate Factual Accuracy in Molecular Comprehension Xingyu Lu He Cao Zijing Liu Shengyuan Bai Leqing Chen Yuan Yao Hai-Tao Zheng Yu Li HILM 19 6 0 13 Mar 2024
Enhancing chest X-ray datasets with privacy-preserving large language models and multi-type annotations: a data-driven approach for improved classification Ricardo Bigolin Lanfredi Pritam Mukherjee Ronald M. Summers 18 4 0 06 Mar 2024
Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey Qizhi Pei Lijun Wu Kaiyuan Gao Jinhua Zhu Yue Wang Zun Wang Tao Qin Rui Yan AI4CE 41 19 0 03 Mar 2024
MediSwift: Efficient Sparse Pre-trained Biomedical Language Models Vithursan Thangarasa Mahmoud Salem Shreyas Saxena Kevin Leong Joel Hestness Sean Lie MedIm 16 1 0 01 Mar 2024
Towards Generalist Prompting for Large Language Models by Mental Models Haoxiang Guan Jiyan He Shuxin Zheng En-Hong Chen Weiming Zhang Neng H. Yu LRM 46 0 0 28 Feb 2024
MedAide: Leveraging Large Language Models for On-Premise Medical Assistance on Edge Devices Abdul Basit Khizar Hussain Muhammad Abdullah Hanif Muhammad Shafique LM&MA 17 5 0 28 Feb 2024
OpenMEDLab: An Open-source Platform for Multi-modality Foundation Models in Medicine Xiaosong Wang Xiaofan Zhang Guotai Wang Junjun He Zhongyu Li ... Jie Zhao Kang Li Xin Sun Lifeng Zhu Shaoting Zhang LM&MA VLM MedIm 25 7 0 28 Feb 2024
On Leveraging Encoder-only Pre-trained Language Models for Effective Keyphrase Generation Di Wu Wasi Uddin Ahmad Kai-Wei Chang 22 3 0 21 Feb 2024
An Evaluation of Large Language Models in Bioinformatics Research Hengchuang Yin Zhonghui Gu Fanhao Wang Yiparemu Abuduhaibaier Yanqiao Zhu Xinming Tu Xian-Sheng Hua Xiao Luo Yizhou Sun LM&MA 24 8 0 21 Feb 2024
How Important is Domain Specificity in Language Models and Instruction Finetuning for Biomedical Relation Extraction? Aviv Brokman Ramakanth Kavuluru LM&MA ALM 21 3 0 21 Feb 2024
ED-Copilot: Reduce Emergency Department Wait Time with Language Model Diagnostic Assistance Liwen Sun Abhineet Agarwal Aaron E. Kornblith Bin-Xia Yu Chenyan Xiong 37 4 0 21 Feb 2024
BiMediX: Bilingual Medical Mixture of Experts LLM Sara Pieri Sahal Shaji Mullappilly Fahad Shahbaz Khan Rao Muhammad Anwer Salman Khan Timothy Baldwin Hisham Cholakkal LM&MA 16 12 0 20 Feb 2024
Benchmarking Retrieval-Augmented Generation for Medicine Guangzhi Xiong Qiao Jin Zhiyong Lu Aidong Zhang RALM 75 143 0 20 Feb 2024
BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domains Yanis Labrak Adrien Bazoge Emmanuel Morin P. Gourraud Mickael Rouvier Richard Dufour 91 188 0 15 Feb 2024
GPT-4's assessment of its performance in a USMLE-based case study Uttam Dhakal Aniket Kumar Singh Suman Devkota Yogesh Sapkota Bishal Lamichhane Suprinsa Paudyal Chandra Dhakal ELM AI4MH LM&MA 10 3 0 15 Feb 2024
Advancing Graph Representation Learning with Large Language Models: A Comprehensive Survey of Techniques Qiheng Mao Zemin Liu Chenghao Liu Zhuo Li Jianling Sun 8 7 0 04 Feb 2024
Comparative Study of Large Language Model Architectures on Frontier Shantia Yarahmadian A. Bose Guojing Cong Richard Yamada Quentin Anthony ELM 25 7 0 01 Feb 2024
Fine-Tuned Large Language Models for Symptom Recognition from Spanish Clinical Text Mai A. Shaaban Abbas Akkasi Adnan Khan Majid Komeili Mohammad Yaqub 8 0 0 28 Jan 2024
Equipping Language Models with Tool Use Capability for Tabular Data Analysis in Finance Adrian Theuma Ehsan Shareghi 14 3 0 27 Jan 2024
Socially Aware Synthetic Data Generation for Suicidal Ideation Detection Using Large Language Models Hamideh Ghanadian I. Nejadgholi Hussein Al Osman SyDa 11 18 0 25 Jan 2024
Developing ChatGPT for Biology and Medicine: A Complete Review of Biomedical Question Answering Qing Li Lei Li Yu Li LM&MA AI4MH 20 6 0 15 Jan 2024
Autocompletion of Chief Complaints in the Electronic Health Records using Large Language Models K. M. S. Islam A. S. Nipu Praveen Madiraju Priya Deshpande LM&MA 24 6 0 11 Jan 2024
EpilepsyLLM: Domain-Specific Large Language Model Fine-tuned with Epilepsy Medical Knowledge Xuyang Zhao Qibin Zhao Toshihisa Tanaka AI4MH 14 1 0 11 Jan 2024
Data-Centric Foundation Models in Computational Healthcare: A Survey Yunkun Zhang Jin Gao Zheling Tan Lingfeng Zhou Kexin Ding Mu Zhou Shaoting Zhang Dequan Wang AI4CE 18 20 0 04 Jan 2024
Predicting Anti-microbial Resistance using Large Language Models Hyunwoo Yoo B. Sokhansanj James R. Brown G. Rosen LM&MA 12 2 0 01 Jan 2024
Differentially Private Low-Rank Adaptation of Large Language Model Using Federated Learning Xiao-Yang Liu Rongyi Zhu Daochen Zha Jiechao Gao Shan Zhong Matt White Meikang Qiu 11 14 0 29 Dec 2023
Towards Probing Contact Center Large Language Models Varun Nathan Ayush Kumar Digvijay Ingle Jithendra Vepa 16 0 0 26 Dec 2023
README: Bridging Medical Jargon and Lay Understanding for Patient Education through Data-Centric NLP Zonghai Yao Nandyala Siddharth Kantu Guanghao Wei Hieu Tran Zhangqi Duan Sunjae Kwon Zhichao Yang Readme annotation team Hong-ye Yu 17 7 0 24 Dec 2023
Collaborative Synthesis of Patient Records through Multi-Visit Health State Inference Hongda Sun Hongzhan Lin Rui Yan SyDa 11 2 0 22 Dec 2023
Benchmarking and Analyzing In-context Learning, Fine-tuning and Supervised Learning for Biomedical Knowledge Curation: a focused study on chemical entities of biological interest Emily Groves Minhong Wang Yusuf Abdulle Holger Kunz J. Hoelscher-Obermaier Ronin Wu Honghan Wu 16 1 0 20 Dec 2023
Large language models in healthcare and medical domain: A review Zabir Al Nazi Wei Peng LM&MA 16 130 0 12 Dec 2023
PaperQA: Retrieval-Augmented Generative Agent for Scientific Research Jakub Lála Odhran O'Donoghue Aleksandar Shtedritski Sam Cox Samuel G. Rodriques Andrew D. White RALM 67 69 0 08 Dec 2023
Speculative Exploration on the Concept of Artificial Agents Conducting Autonomous Research Shiro Takagi 29 0 0 06 Dec 2023
Explanatory Argument Extraction of Correct Answers in Resident Medical Exams Iakes Goenaga Aitziber Atutxa Koldo Gojenola Maite Oronoz Rodrigo Agerri ELM 50 8 0 01 Dec 2023
Biomedical knowledge graph-optimized prompt generation for large language models Karthik Soman Peter W Rose John H Morris Rabia E Akbas Brett Smith ... Angela Rizk-Jackson Sharat Israni Charlotte A. Nelson Sui Huang Sergio Baranzini AI4MH 11 23 0 29 Nov 2023
Can Generalist Foundation Models Outcompete Special-Purpose Tuning? Case Study in Medicine Harsha Nori Yin Tat Lee Sheng Zhang Dean Carignan Richard Edgar ... Hoifung Poon Tao Qin Naoto Usuyama Chris White Eric Horvitz LM&MA AI4MH MedIm ELM 13 288 0 28 Nov 2023
BioLORD-2023: Semantic Textual Representations Fusing LLM and Clinical Knowledge Graph Insights François Remy Kris Demuynck Thomas Demeester 14 3 0 27 Nov 2023
Walking a Tightrope -- Evaluating Large Language Models in High-Risk Domains Chia-Chien Hung Wiem Ben-Rim Lindsay Frost Lars Bruckner Carolin (Haas) Lawrence AILaw ALM ELM 12 9 0 25 Nov 2023
Comparison of pipeline, sequence-to-sequence, and GPT models for end-to-end relation extraction: experiments with the rare disease use-case Shashank Gupta Xuguang Ai Ramakanth Kavuluru 8 3 0 22 Nov 2023
nach0: Multimodal Natural and Chemical Languages Foundation Model M. Livne Z. Miftahutdinov E. Tutubalina Maksim Kuznetsov Daniil Polykovskiy ... Aastha Jhunjhunwala Anthony Costa Alex Aliper Alán Aspuru-Guzik Alex Zhavoronkov AI4CE 6 12 0 21 Nov 2023
AcademicGPT: Empowering Academic Research Shufa Wei Xiaolong Xu Xianbiao Qi Xi Yin Jun Xia ... Chihao Dai Lihua Wang Xiaohui Liu Lei Zhang Yutao Xie LM&MA 31 3 0 21 Nov 2023
Unifying Corroborative and Contributive Attributions in Large Language Models Theodora Worledge Judy Hanwen Shen Nicole Meister Caleb Winston Carlos Guestrin TDI 6 10 0 20 Nov 2023
Taiyi: A Bilingual Fine-Tuned Large Language Model for Diverse Biomedical Tasks Ling Luo Jinzhong Ning Yingwen Zhao Zhijun Wang Zeyuan Ding ... Yuqi Liu Zhihao Yang Jian Wang Yuanyuan Sun Hongfei Lin LM&MA 80 45 0 20 Nov 2023
CARE: Extracting Experimental Findings From Clinical Literature Aakanksha Naik Bailey Kuehl Erin Bransom Doug Downey Tom Hope 8 1 0 16 Nov 2023
LongBoX: Evaluating Transformers on Long-Sequence Clinical Tasks Mihir Parmar Aakanksha Naik Himanshu Gupta Disha Agrawal Chitta Baral LM&MA 17 3 0 16 Nov 2023