BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

33 / 483 papers shown

Title
Entity-Enriched Neural Models for Clinical Question Answering Bhanu Pratap Singh Rawat W. Weng So Yeon Min Preethi Raghavan Peter Szolovits 18 18 0 13 May 2020
Detecting Adverse Drug Reactions from Twitter through Domain-Specific Preprocessing and BERT Ensembling Amy Breden L. Moore 23 13 0 11 May 2020
An Empirical Study of Multi-Task Learning on BERT for Biomedical Text Mining Yifan Peng Qingyu Chen Zhiyong Lu 6 112 0 06 May 2020
CAiRE-COVID: A Question Answering and Query-focused Multi-Document Summarization System for COVID-19 Scholarly Information Management Dan Su Yan Xu Tiezheng Yu Farhad Bin Siddique Elham J. Barezi Pascale Fung RALM 11 31 0 04 May 2020
QURIOUS: Question Generation Pretraining for Text Generation Shashi Narayan Gonçalo Simães Ji Ma Hannah Craighead Ryan T. McDonald 29 15 0 23 Apr 2020
Train No Evil: Selective Masking for Task-Guided Pre-Training Yuxian Gu Zhengyan Zhang Xiaozhi Wang Zhiyuan Liu Maosong Sun 24 59 0 21 Apr 2020
Augmented Curation of Unstructured Clinical Notes from a Massive EHR System Reveals Specific Phenotypic Signature of Impending COVID-19 Diagnosis F. Shweta K. Murugadoss S. Awasthi A. Venkatakrishnan Arjun Puranik ... G. Gores A. Williams J. Halamka V. Soundararajan A. Badley 6 26 0 17 Apr 2020
Calibrating Structured Output Predictors for Natural Language Processing Abhyuday N. Jagannatha Hong-ye Yu 20 28 0 09 Apr 2020
Continual Domain-Tuning for Pretrained Language Models Subendhu Rongali Abhyuday N. Jagannatha Bhanu Pratap Singh Rawat Hong-ye Yu CLL KELM 6 7 0 05 Apr 2020
A Survey of Deep Learning for Scientific Discovery M. Raghu Erica Schmidt OOD AI4CE 38 120 0 26 Mar 2020
Pre-trained Models for Natural Language Processing: A Survey Xipeng Qiu Tianxiang Sun Yige Xu Yunfan Shao Ning Dai Xuanjing Huang LM&MA VLM 243 1,450 0 18 Mar 2020
Investigating Entity Knowledge in BERT with Simple Neural End-To-End Entity Linking Samuel Broscheit OCL 28 118 0 11 Mar 2020
Federated pretraining and fine tuning of BERT using clinical notes from multiple silos Dianbo Liu Timothy A. Miller AI4MH 30 34 0 20 Feb 2020
The Utility of General Domain Transfer Learning for Medical Language Tasks D. Ranti Katie Hanss Shan Zhao Varun Arvind J. Titano A. Costa Eric Oermann LM&MA MedIm 6 7 0 16 Feb 2020
Explaining Relationships Between Scientific Documents Kelvin Luu Xinyi Wu Rik Koncel-Kedziorski Kyle Lo Isabel Cachola Noah A. Smith 41 48 0 02 Feb 2020
AutoDiscern: Rating the Quality of Online Health Information with Hierarchical Encoder Attention-based Neural Networks Laura Kinkead Ahmed Allam Michael Krauthammer 17 19 0 30 Dec 2019
Multilingual is not enough: BERT for Finnish Antti Virtanen Jenna Kanerva Rami Ilo Jouni Luoma Juhani Luotolahti T. Salakoski Filip Ginter S. Pyysalo 25 277 0 15 Dec 2019
Evaluating robustness of language models for chief complaint extraction from patient-generated text Ilya Valmianski Caleb Goodwin Ian M. Finn Naqi Khan D. Zisook 24 6 0 15 Nov 2019
Knowledge Guided Named Entity Recognition for BioMedical Text Pratyay Banerjee Kuntal Kumar Pal M. Devarakonda Chitta Baral 19 0 0 10 Nov 2019
Deep Bidirectional Transformers for Relation Extraction without Supervision Yannis Papanikolaou Ian Roberts Andrea Pierleoni ViT 9 21 0 01 Nov 2019
Keyphrase Extraction from Scholarly Articles as Sequence Labeling using Contextualized Embeddings Dhruva Sahrawat Debanjan Mahata Mayank Kulkarni Haimin Zhang Rakesh Gosangi Amanda Stent Agniv Sharma Yaman Kumar Singla R. Shah Roger Zimmermann 9 30 0 19 Oct 2019
On the use of BERT for Neural Machine Translation S. Clinchant K. Jung Vassilina Nikoulina 19 89 0 27 Sep 2019
Does BERT Make Any Sense? Interpretable Word Sense Disambiguation with Contextualized Embeddings Gregor Wiedemann Steffen Remus Avi Chawla Chris Biemann 19 174 0 23 Sep 2019
Bridging the domain gap in cross-lingual document classification Guokun Lai Barlas Oğuz Yiming Yang Veselin Stoyanov VLM 22 14 0 16 Sep 2019
PubMedQA: A Dataset for Biomedical Research Question Answering Qiao Jin Bhuwan Dhingra Zhengping Liu William W. Cohen Xinghua Lu 210 812 0 13 Sep 2019
Scientific Discourse Tagging for Evidence Extraction Xiangci Li Gully A. Burns Nanyun Peng 25 5 0 10 Sep 2019
BERT-based Ranking for Biomedical Entity Normalization Zongcheng Ji Qiang Wei Hua Xu OOD MedIm 22 121 0 09 Aug 2019
Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasets Yifan Peng Shankai Yan Zhiyong Lu LM&MA AI4MH 13 830 0 13 Jun 2019
Publicly Available Clinical BERT Embeddings Emily Alsentzer John R. Murphy Willie Boag W. Weng Di Jin Tristan Naumann Matthew B. A. McDermott AI4MH 11 1,928 0 06 Apr 2019
Unsupervised Domain Adaptation of Contextualized Embeddings for Sequence Labeling Xiaochuang Han Jacob Eisenstein 14 20 0 04 Apr 2019
Probing Biomedical Embeddings from Language Models Qiao Jin Bhuwan Dhingra William W. Cohen Xinghua Lu 16 116 0 03 Apr 2019
Enhancing Clinical Concept Extraction with Contextual Embeddings Yuqi Si Jingqi Wang Hua Xu Kirk Roberts AI4MH 21 286 0 22 Feb 2019
Google's Neural Machine Translation System: Bridging the Gap between Human and Machine Translation Yonghui Wu M. Schuster Z. Chen Quoc V. Le Mohammad Norouzi ... Alex Rudnick Oriol Vinyals G. Corrado Macduff Hughes J. Dean AIMat 716 6,743 0 26 Sep 2016