BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

50 / 490 papers shown

Title
Nested Named Entity Recognition as Latent Lexicalized Constituency Parsing Chao Lou Songlin Yang Kewei Tu 30 37 0 09 Mar 2022
Adaptor: Objective-Centric Adaptation Framework for Language Models Michal vStefánik Vít Novotný Nikola Groverová Petr Sojka 29 10 0 08 Mar 2022
Quantifying Privacy Risks of Masked Language Models Using Membership Inference Attacks Fatemehsadat Mireshghallah Kartik Goyal Archit Uniyal Taylor Berg-Kirkpatrick Reza Shokri MIALM 32 151 0 08 Mar 2022
Contextual Semantic Embeddings for Ontology Subsumption Prediction Jiaoyan Chen Yuan He Yuxia Geng Ernesto Jiménez-Ruiz Hang Dong Ian Horrocks 35 50 0 20 Feb 2022
VaccineLies: A Natural Language Resource for Learning to Recognize Misinformation about the COVID-19 and HPV Vaccines Maxwell Weinzierl S. Harabagiu 22 11 0 18 Feb 2022
Identifying the Adoption or Rejection of Misinformation Targeting COVID-19 Vaccines in Twitter Discourse Maxwell Weinzierl S. Harabagiu 24 18 0 18 Feb 2022
Neighborhood Contrastive Learning for Scientific Document Representations with Citation Embeddings Malte Ostendorff Nils Rethmeier Isabelle Augenstein Bela Gipp Georg Rehm 19 73 0 14 Feb 2022
ET-BERT: A Contextualized Datagram Representation with Pre-training Transformers for Encrypted Traffic Classification Xinjie Lin G. Xiong Gaopeng Gou Zhen Li Junzheng Shi J. Yu 15 235 0 13 Feb 2022
TimeLMs: Diachronic Language Models from Twitter Daniel Loureiro Francesco Barbieri Leonardo Neves Luis Espinosa Anke Jose Camacho-Collados 30 247 0 08 Feb 2022
RerrFact: Reduced Evidence Retrieval Representations for Scientific Claim Verification Ashish Rana Deepanshu Khanna Tirthankar Ghosal Muskaan Singh Harpreet Singh P. Rana 12 5 0 05 Feb 2022
GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Records Xi Yang Aokun Chen Nima M. Pournejatian Hoo-Chang Shin Kaleb E. Smith ... Duane A. Mitchell W. Hogan E. Shenkman Jiang Bian Yonghui Wu AI4MH LM&MA 37 499 0 02 Feb 2022
Clinical-Longformer and Clinical-BigBird: Transformers for long clinical sequences Yikuan Li R. M. Wehbe F. Ahmad Hanyin Wang Yuan Luo VLM MedIm 147 85 0 27 Jan 2022
The Text Anonymization Benchmark (TAB): A Dedicated Corpus and Evaluation Framework for Text Anonymization Ildikó Pilán Pierre Lison Lilja Ovrelid Anthia Papadopoulou David Sánchez Montserrat Batet AILaw 10 74 0 25 Jan 2022
Multimodal data matters: language model pre-training over structured and unstructured electronic health records Sicen Liu Xiaolong Wang Yongshuai Hou Ge Li Hui Wang Huiqin Xu Yang Xiang Buzhou Tang 52 30 0 25 Jan 2022
Improving Chest X-Ray Report Generation by Leveraging Warm Starting Aaron Nicolson Jason Dowling Bevan Koopman ViT LM&MA MedIm 30 90 0 24 Jan 2022
Improving Biomedical Information Retrieval with Neural Retrievers Man Luo Arindam Mitra Tejas Gokhale Chitta Baral 35 32 0 19 Jan 2022
Transferability in Deep Learning: A Survey Junguang Jiang Yang Shu Jianmin Wang Mingsheng Long OOD 34 101 0 15 Jan 2022
LAME: Layout Aware Metadata Extraction Approach for Research Articles Jonghyun Choi Hyesoo Kong Hwamook Yoon Heung-Seon Oh Yuchul Jung 33 3 0 23 Dec 2021
Predicting Patient Readmission Risk from Medical Text via Knowledge Graph Enhanced Multiview Graph Convolution Qiuhao Lu Thien Huu Nguyen Dejing Dou 33 19 0 19 Dec 2021
Neural Architectures for Biological Inter-Sentence Relation Extraction Enrique Noriega-Atala Peter Lovett Clayton T. Morrison Mihai Surdeanu NAI 27 3 0 17 Dec 2021
Efficient Hierarchical Domain Adaptation for Pretrained Language Models Alexandra Chronopoulou Matthew E. Peters Jesse Dodge 23 42 0 16 Dec 2021
UPV at TREC Health Misinformation Track 2021 Ranking with SBERT and Quality Estimators Ipek Baris Schlicht Angel Felipe Magnossão de Paula Paolo Rosso 25 8 0 11 Dec 2021
Explainable Deep Learning in Healthcare: A Methodological Survey from an Attribution View Di Jin Elena Sergeeva W. Weng Geeticka Chauhan Peter Szolovits OOD 31 55 0 05 Dec 2021
MultiVerS: Improving scientific claim verification with weak supervision and full-document context David Wadden Bertie Vidgen Lucy Lu Wang Dirk Hovy J. Pierrehumbert Hannaneh Hajishirzi 27 151 0 02 Dec 2021
What Do You See in this Patient? Behavioral Testing of Clinical NLP Models Betty van Aken S. Herrmann Alexander Loser 18 11 0 30 Nov 2021
Natural Language Processing in-and-for Design Research L. Siddharth L. Blessing Jianxi Luo AI4CE 28 41 0 27 Nov 2021
BCH-NLP at BioCreative VII Track 3: medications detection in tweets using transformer networks and multi-task learning Dongfang Xu Shan Chen T. Miller MedIm 12 4 0 26 Nov 2021
Few-shot Named Entity Recognition with Cloze Questions V. Gatta V. Moscato Marco Postiglione Giancarlo Sperlí 19 4 0 24 Nov 2021
Improving Tagging Consistency and Entity Coverage for Chemical Identification in Full-text Articles Hyunjae Kim Mujeen Sung Wonjin Yoon Sungjoon Park Jaewoo Kang 16 10 0 20 Nov 2021
Literature-Augmented Clinical Outcome Prediction Aakanksha Naik Sravanthi Parasa Sergey Feldman Lucy Lu Wang Tom Hope LM&MA 18 25 0 16 Nov 2021
Testing the Generalization of Neural Language Models for COVID-19 Misinformation Detection Jan Philip Wahle Nischal Ashok Kumar Terry Ruas Norman Meuschke Tirthankar Ghosal Bela Gipp 30 17 0 15 Nov 2021
CU-UD: text-mining drug and chemical-protein interactions with ensembles of BERT-based models M. Karabulut K. Vijay-Shanker Yifan Peng 21 3 0 11 Nov 2021
Recent Advances in Automated Question Answering In Biomedical Domain K. D. Baksi 22 0 0 10 Nov 2021
Focusing on Potential Named Entities During Active Label Acquisition Ali Osman Berk Şapcı Oznur Tastan Reyyan Yeniterzi 27 2 0 06 Nov 2021
Recent Advances in Natural Language Processing via Large Pre-Trained Language Models: A Survey Bonan Min Hayley L Ross Elior Sulem Amir Pouran Ben Veyseh Thien Huu Nguyen Oscar Sainz Eneko Agirre Ilana Heinz Dan Roth LM&MA VLM AI4CE 74 1,030 0 01 Nov 2021
Clinical Evidence Engine: Proof-of-Concept For A Clinical-Domain-Agnostic Decision Support Infrastructure Bojian Hou Hao Zhang Gur Ladizhinsky Gur Ladizhinsky Stephen Yang Volodymyr Kuleshov Fei Wang Qian Yang 9 4 0 31 Oct 2021
FinEAS: Financial Embedding Analysis of Sentiment Asier Gutiérrez-Fandiño M. N. Alonso P. Kolm Jordi Armengol-Estapé AIFin 12 6 0 31 Oct 2021
Backdoor Pre-trained Models Can Transfer to All Lujia Shen S. Ji Xuhong Zhang Jinfeng Li Jing Chen Jie Shi Chengfang Fang Jianwei Yin Ting Wang AAML SILM 31 117 0 30 Oct 2021
BioIE: Biomedical Information Extraction with Multi-head Attention Enhanced Graph Convolutional Network Jialun Wu Yang Liu Zeyu Gao Tieliang Gong Chunbao Wang Chen Li 29 16 0 26 Oct 2021
ClimateBert: A Pretrained Language Model for Climate-Related Text Nicolas Webersinke Mathias Kraus Jiabo Huang Markus Leippold AI4CE 21 131 0 22 Oct 2021
Building Chinese Biomedical Language Models via Multi-Level Text Discrimination Quan Wang Songtai Dai Benfeng Xu Yajuan Lyu Yong Zhu Hua-Hong Wu Haifeng Wang 63 14 0 14 Oct 2021
Open-Domain Question-Answering for COVID-19 and Other Emergent Domains Sharon Levy Kevin Mo Wenhan Xiong Luu Anh Tuan OOD LRM 41 12 0 13 Oct 2021
Bottom-Up Constituency Parsing and Nested Named Entity Recognition with Pointer Networks Songlin Yang Kewei Tu 43 45 0 11 Oct 2021
K-Wav2vec 2.0: Automatic Speech Recognition based on Joint Decoding of Graphemes and Syllables Jounghee Kim Pilsung Kang VLM 21 6 0 11 Oct 2021
Advances in Multi-turn Dialogue Comprehension: A Survey Zhuosheng Zhang Hai Zhao 21 21 0 11 Oct 2021
Self-Supervised Knowledge Assimilation for Expert-Layman Text Style Transfer Wenda Xu Michael Stephen Saxon Misha Sra Luu Anh Tuan MedIm 11 13 0 06 Oct 2021
JuriBERT: A Masked-Language Model Adaptation for French Legal Text S. Douka Hadi Abdine Michalis Vazirgiannis Rajaa El Hamdani David Restrepo Amariles AILaw 87 31 0 04 Oct 2021
Coreference Resolution for the Biomedical Domain: A Survey Pengcheng Lu Massimo Poesio 26 15 0 25 Sep 2021
Slot Filling for Biomedical Information Extraction Yannis Papanikolaou Marlene Staib Justin Grace Francine Bennett MedIm 27 12 0 17 Sep 2021
Spanish Biomedical Crawled Corpus: A Large, Diverse Dataset for Spanish Biomedical Language Models C. Carrino Jordi Armengol-Estapé Ona de Gibert Bonet Asier Gutiérrez-Fandiño Aitor Gonzalez-Agirre Martin Krallinger Marta Villegas 16 20 0 16 Sep 2021